PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540471.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bZIP

Protein Properties

Length: 401aa MW: 42796.1 Da PI: 6.6153

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.3	2.9e-22	295	357	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL ++++L++eN +L++e+++++ e+++l se+ XP_023540471.1 295 ERELKRQRRKQSNRESARRSRLRKQAECDELGHRAEALQEENASLRSEVNRIRSEYEQLLSEN 357 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MSSSEMEKPP KDKETKTPPL TTQEQTSTTS AGAVNPDWSG FQAYSPMPPH GFLASSPQAH 60 PYMWGVQHIM PPYGTPPHPY VAMYPPGGIY AHPSIPPGSY PFSPFAMPSP NGITEASGNT 120 AGSLDGEGKP PEVKEKLPIK RSKGSLGSLN MITGKNNELG KTSGTSANGA YSKSGESASE 180 GTSEGSDANS QNESQPKLGS RQDTLEGEAS QNGNSMHGTQ NGGSNTQAMT VIPLAAAGAP 240 GVIPGPTTNL NIGMDYWGAS SAIPAMHGKV PSTRVAGGLV GSRDSVQSQL WLQDERELKR 300 QRRKQSNRES ARRSRLRKQA ECDELGHRAE ALQEENASLR SEVNRIRSEY EQLLSENTSL 360 KERLGEVTGN EEVRASRNGQ HSSNETTQLT ESEVVQVGIK N

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MSSSEMEKPP KDKETKTPPL TTQEQTSTTS AGAVNPDWSG FQAYSPMPPH GFLASSPQAH  60
PYMWGVQHIM PPYGTPPHPY VAMYPPGGIY AHPSIPPGSY PFSPFAMPSP NGITEASGNT  120
AGSLDGEGKP PEVKEKLPIK RSKGSLGSLN MITGKNNELG KTSGTSANGA YSKSGESASE  180
GTSEGSDANS QNESQPKLGS RQDTLEGEAS QNGNSMHGTQ NGGSNTQAMT VIPLAAAGAP  240
GVIPGPTTNL NIGMDYWGAS SAIPAMHGKV PSTRVAGGLV GSRDSVQSQL WLQDERELKR  300
QRRKQSNRES ARRSRLRKQA ECDELGHRAE ALQEENASLR SEVNRIRSEY EQLLSENTSL  360
KERLGEVTGN EEVRASRNGQ HSSNETTQLT ESEVVQVGIK N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	312	318	RRSRLRK
2	312	319	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-153	bZIP family protein