PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540510.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NF-YB

Protein Properties

Length: 252aa MW: 27608.7 Da PI: 6.3545

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	164.3	1.6e-51	96	192	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++ +d+lwa+++lGf+dy+epl+v+l++yre e+ XP_023540510.1 96 VREQDQYMPIANVRRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTVEDVLWAIGKLGFDDYIEPLTVFLNRYRESES 190 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_023540510.1 191 DR 192 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MECGGSATGG GDGFHSYIRQ QPKPTSDIFI SKISLLPFAS LNVLLTANKS SSANNTHNTN 60 HQQVNGRNLA TNSPVTGSTP ASIAATNNEQ SQQCIVREQD QYMPIANVRR IMRRILPSHA 120 KISDDAKETI QECVSEYISF ITGEANERCQ REQRKTVTVE DVLWAIGKLG FDDYIEPLTV 180 FLNRYRESES DRIRTEPILR RNVDYGPQVG MVPPYGQTFQ IGHVPSGMFD AMGGYYDGGG 240 NGGASSGNGN QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	5e-63	NF-YB family protein