PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540511.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NF-YB

Protein Properties

Length: 239aa MW: 26146.9 Da PI: 6.3535

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	164.5	1.4e-51	83	179	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++ +d+lwa+++lGf+dy+epl+v+l++yre e+ XP_023540511.1 83 VREQDQYMPIANVRRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTVEDVLWAIGKLGFDDYIEPLTVFLNRYRESES 177 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_023540511.1 178 DR 179 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MECGGSATGG GDGFHSYIRQ QPKPTSALNV LLTANKSSSA NNTHNTNHQQ VNGRNLATNS 60 PVTGSTPASI AATNNEQSQQ CIVREQDQYM PIANVRRIMR RILPSHAKIS DDAKETIQEC 120 VSEYISFITG EANERCQREQ RKTVTVEDVL WAIGKLGFDD YIEPLTVFLN RYRESESDRI 180 RTEPILRRNV DYGPQVGMVP PYGQTFQIGH VPSGMFDAMG GYYDGGGNGG ASSGNGNQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	4e-63	NF-YB family protein