PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540667.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 201aa    MW: 22760.8 Da    PI: 9.056
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-1980129255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp     +  r++lg++ tae+Aa+a+++a+ +++g
  XP_023540667.1  80 KYRGIRRRP-WGKWAAEIRDPH----KgYRVWLGTYNTAEDAARAYDQAAIRIRG 129
                     8********.**********72....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MCGGAMASDF VQPKSSGKSV VDNHLWPQLD TFSDLSGKTD PNNPANGLEI QSRLSQVKGE  60
KPEEFEAGEK EKVKRVRKNK YRGIRRRPWG KWAAEIRDPH KGYRVWLGTY NTAEDAARAY  120
DQAAIRIRGK KAKLNFTHPP PPPPPSPPLP LQPQPLATPT DVELKDQISR LESFLCLDPE  180
PTPDLWWVDE LLAYQDQNRI L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17488KRVRKNKYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.15e-24ERF family protein