PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540688.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 211aa    MW: 23173.9 Da    PI: 7.6706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540688.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-183686256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g+
  XP_023540688.1 36 TYRGVRMRQ-WGKWVSEIREPKK---KSRIWLGTFSTPEMAARAHDVAARTIKGH 86
                    69****998.**********854...6***********************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MEDPLQRFQF QSSSSSDMKE KNSKKMKLGN DGKHPTYRGV RMRQWGKWVS EIREPKKKSR  60
IWLGTFSTPE MAARAHDVAA RTIKGHSAYL NFPELAHRFP RPASSSAKDI RAAAAKAATF  120
PINSTDEDDD DDAASQSDRN CSPSSVAAAA AAAAKSPGEI DDPFFDLPDL FLHPNHQIGT  180
FCLSQMLPID GFDSAFGRPP SPSEYFAATP P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.15e-39ERF family protein