PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540840.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 287aa    MW: 31115 Da    PI: 5.4714
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540840.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-19147197255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  XP_023540840.1 147 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 197
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MMYEQSNSSE SDFVLLESIR RHLFVDSDSL RCGNFAVAGA TAPVFCRTSS FGSLYPCLTE  60
KWGALPLRED DSEDMVLAGV LHDAVQFGWV PSLGSSLPET FNFGFSDVKP EPEILPPVNI  120
SPEVIETKVA VAVADPLPVV VPAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET  180
AEDAALAYDR AAYRMRGSKA LLNFPLRVNS GEPDPVRVTS KRSSSRSSPE PTSSCTSVES  240
GSPKRRKKTD GTTMPTAQAA PESIQLGEGT NAIQVETDVA KYTSGEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-61ERF family protein