PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540856.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 168aa    MW: 18447.6 Da    PI: 6.6262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.42.7e-161159255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykG+r ++ +g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++ a+++l+g
  XP_023540856.1 11 HYKGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPSPEMAAAAYDVAALALKG 59
                    7****9.55.6*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MASTSSNKHH HYKGIRCRSG KWVSEIREPR KTTRIWLGTY PSPEMAAAAY DVAALALKGC  60
NAVLNFPDSI GSYPVPTSMS PADIRVAAAT AAAASKRIDH EEGSYNSHHQ SPPPDEFVDE  120
EALFGMPNLL VDMAEGMLLS PPRISSSPSR HEYYSWNSSG DGNLWSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-38ERF family protein