PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023540889.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 349aa    MW: 36985.9 Da    PI: 8.7403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023540889.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11283328655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L+el+P+     +k  s +++L +Av++Ik Lq
  XP_023540889.1 283 SIAERERRTRISGKLKKLQELVPNM----DKQTSYSDMLDLAVQHIKGLQ 328
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MYQSTSSSSS SHNSMPSSHA GGGGLTRYGS APGSLLNSAV DSVIGKRHPD SDAFLRTPPS  60
FGGHFFSSAE SSVVESSRKV VQSSSTSNDL KSSAVAAAAL QRSYGLHDLA LEDFSTARDF  120
NSNGGQSSSS SPLVRQRSSP AGFLGHLSVA EGTGGFSLTR GGGGGIGRLK SQLSFSGGQD  180
SVSQMSSMSE SVVEGSSSHS FAPTAFAMDS WDTSNSIAFA APHPKRSKLL HSDGDFFTGL  240
DSQFSLPQTS FEMATVERLL QIPEDSVPCK IRAKRGCATH PRSIAERERR TRISGKLKKL  300
QELVPNMDKQ TSYSDMLDLA VQHIKGLQNQ IQKLNKEVQN CTCGSKECS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.22e-61bHLH family protein