PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023540999.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 220aa MW: 26799.2 Da PI: 9.385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023540999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.2	5e-15	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd +l v+++G + W++Ia+ g+ R++k+c+ rw++yl XP_023540999.1 13 RGPWLQEEDRRLTMFVTRMGERKWDSIAKASGLERSGKSCRFRWLNYL 60 89********************************************97 PP
2	Myb_DNA-binding	44.6	3.3e-14	67	111	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +r E+e++ +++k++G++ W++Iar ++ gRt++++k++w+++l XP_023540999.1 67 DRINSKEEEIIMKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRSHL 111 566678*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MATHSALQAV QRRGPWLQEE DRRLTMFVTR MGERKWDSIA KASGLERSGK SCRFRWLNYL 60 RPNLKRDRIN SKEEEIIMKL HKKWGNKWSR IARWLPGRTD NEIKNYWRSH LRKKFPIQLE 120 DCKVKHGKQD KLSLRHDQNE RDVPLYNHFE LSNLEITNSP YEIRLSNWIS NQLINEKQEV 180 NHHEECNNLE FCFYSPNMNY AHRDDQTDHF WDSFTLWDIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	2e-49	MYB family protein