PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541045.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 246aa    MW: 28115.1 Da    PI: 8.336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541045.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-0977126354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +h erEr+RR+++   +  Lr+llP  +   ++K   ++    Av+YIk+ 
  XP_023541045.1  77 LMHRERERQRRQEMGALYMSLRTLLPLEF--IKGKRAISDQMNGAVNYIKYQ 126
                     58*************************65..*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MFPLQKCEDK CFQISFNPHQ HIIPEDLIFG PQVSVEAHDD SNNNNNNGVN NLGTRGRRKL  60
LQNLDHGVSD QDHQIKLMHR ERERQRRQEM GALYMSLRTL LPLEFIKGKR AISDQMNGAV  120
NYIKYQKKKI KEFEAKRDEL KKLYNSSNDL EISRGQTPIC SFKVSSFDGG LEILIITNDF  180
HGFPLSRILK VIVDQGLDVV RCGSTTMNDK SMHTIQMEVS DSTTLDLSQL GKKLTEAVPQ  240
LKQVTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.11e-31bHLH family protein