PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541120.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 230aa MW: 24107.7 Da PI: 10.3783

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.5	1.2e-38	29	119	2	93
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaks 93 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ + s s+ +++ss++ ++++ XP_023541120.1 29 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-SISLSVRGNASSASLSSTT 119 78*******************************************************************777.3333333333333322222 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSNSETADSS NGAAIDTHKN QPSSNGALAV KKPPSKDRHS KVDGRGRRIR MPIICAARVF 60 QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTTPANFS SISLSVRGNA SSASLSSTTS 120 TLSLSRPQPF ILGKRVRADD DGGTDDGLGV GPSGYWAIPA RPDYGQVWSF AAAAAAEQGI 180 SQPASLFAQQ QQPIRESSAA RVGNYLPGHL NLLASLSGGG GAGRREDDRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	1e-64	TCP family protein