PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023541672.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 587aa MW: 65040.5 Da PI: 5.4831

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023541672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.8	3.6e-52	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++k+ePwdLp + +k+++ ew+fF+++d+ky++g+r +rat++gyWkatgkd++++ XP_023541672.1 9 LPLGFRFRPTDEELINFYLRSKINGNHEEV-SVIREIDVCKWEPWDLPdlSIIKTKDPEWFFFCPQDRKYPNGHRLKRATDAGYWKATGKDRKIK 102 699**********************888.99**********96447788889*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++l+g+kktLvfykgrapkg++t+Wv+heyr+ XP_023541672.1 103 S-GTNLIGMKKTLVFYKGRAPKGKRTNWVVHEYRA 136 .99****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 587 aa Download sequence
MAVLTLSSLP LGFRFRPTDE ELINFYLRSK INGNHEEVSV IREIDVCKWE PWDLPDLSII 60 KTKDPEWFFF CPQDRKYPNG HRLKRATDAG YWKATGKDRK IKSGTNLIGM KKTLVFYKGR 120 APKGKRTNWV VHEYRATLKE LDGTNPGQSA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT 180 TADSSPGPGD SHSEPIPPLV SPSLPGRAES SDEVASETVE HPDGSAEISC FDSYNAEMDP 240 HPYEKKNYCV SEDEPLDSKL FSPLRSQLQA ELGSSGIYYS DSNYLNFDTN ANAVQQLQSG 300 TEESDYIYQF IDSFDCNLDD FALEDFQIPN NTMASLDYRF YGEVEAENSK KSKVMSELES 360 SICLEDIDRK IPIIEHTETA PTEQGQFFNP SGSLPESCNQ LSAEGSTDAT AGIQRISRRQ 420 RSQQQHNEFS ASQGTAPRRL RLQRILAAPS SRSSKMCSAS GGRRDDDPPS ISSKEKKASE 480 NKSIGGVCGS DDGFDDVKQP QMRTGAAESG VSSGKASQEA SSKSVASYSS KIGFVTGKRR 540 LAKALPPSVL SYVSIVRVVV VVLSIIFISI WKWCKRDQRG YPVSPFR

Sequence ? help Back to Top

Protein Sequence Length: 587 aa Download sequence

MAVLTLSSLP LGFRFRPTDE ELINFYLRSK INGNHEEVSV IREIDVCKWE PWDLPDLSII  60
KTKDPEWFFF CPQDRKYPNG HRLKRATDAG YWKATGKDRK IKSGTNLIGM KKTLVFYKGR  120
APKGKRTNWV VHEYRATLKE LDGTNPGQSA FVLCRLFKKQ DESIEGSNGD EAEAAISSPT  180
TADSSPGPGD SHSEPIPPLV SPSLPGRAES SDEVASETVE HPDGSAEISC FDSYNAEMDP  240
HPYEKKNYCV SEDEPLDSKL FSPLRSQLQA ELGSSGIYYS DSNYLNFDTN ANAVQQLQSG  300
TEESDYIYQF IDSFDCNLDD FALEDFQIPN NTMASLDYRF YGEVEAENSK KSKVMSELES  360
SICLEDIDRK IPIIEHTETA PTEQGQFFNP SGSLPESCNQ LSAEGSTDAT AGIQRISRRQ  420
RSQQQHNEFS ASQGTAPRRL RLQRILAAPS SRSSKMCSAS GGRRDDDPPS ISSKEKKASE  480
NKSIGGVCGS DDGFDDVKQP QMRTGAAESG VSSGKASQEA SSKSVASYSS KIGFVTGKRR  540
LAKALPPSVL SYVSIVRVVV VVLSIIFISI WKWCKRDQRG YPVSPFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	2e-95	NAC family protein