PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023541749.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 222aa    MW: 24284.8 Da    PI: 5.0072
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023541749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-182472355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a++ a+++l+g
  XP_023541749.1 24 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAAVAYDCAARSLRG 72
                    67******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSPSPSKPKR KQQQPPPETT PHRFLGVRRR PWGRYAAEIR DPSTKERHWL GTFDTAEEAA  60
VAYDCAARSL RGSLARTNFL YSDSLPPPPP PPSAALPPNQ APLLLPTPPP HFHQIPPSRD  120
SPPSLFSVDG DGGAELPPFP PAISSESENY NYNYNYNQGL MELQNSGFEY FDQSPTDIGS  180
CFGFDSSSEY VHGPIFGSMP AVSDAGAGEF LSPAANFYFP QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-26ERF family protein