PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542005.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 188aa    MW: 19632.6 Da    PI: 5.1804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-162170155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr  +++g+Wv+eIr p++   ++r++lg++ t+++Aa+a++ a+++l+g
  XP_023542005.1 21 PKFRGVR--SRSGKWVSEIRQPRQ---TTRIWLGTYPTPDMAAAAYDVAALALKG 70
                    79****6..668*********943...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MSDDTQSSSS SSSSSSSNRH PKFRGVRSRS GKWVSEIRQP RQTTRIWLGT YPTPDMAAAA  60
YDVAALALKG PDASLNFPDA LLSYRIPSST SPSDIRAAAA LAAAARHPDT APAPAAHTHP  120
VGGSGFSSDA TAAAAAGEFV DEEELLNMPN LLVDMAEGML VSPPRIKSLS SDDSPTNSPG  180
DGLWSYSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-43ERF family protein