PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542047.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 567aa    MW: 62920.6 Da    PI: 4.3368
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.81.7e-5291361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     l+pGfrFhPtdeelv++yLk+kv+gk+++l + i+ +diyk+ePwdLp k k+k+++ ewyfFs  d+ky +++r+nrat++gyWk+tgkd++v 
  XP_023542047.1   9 LAPGFRFHPTDEELVSYYLKRKVSGKPFRL-DPISVIDIYKSEPWDLPgKsKLKTRDLEWYFFSALDRKYGNSSRTNRATEKGYWKTTGKDRPVR 102
                     579***************************.89***************5347777888************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++++vg+kktLv++ grap+g +t+Wvmhey+l
  XP_023542047.1 103 H-NSTTVGMKKTLVYHIGRAPRGARTNWVMHEYKL 136
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
MGRDSATSLA PGFRFHPTDE ELVSYYLKRK VSGKPFRLDP ISVIDIYKSE PWDLPGKSKL  60
KTRDLEWYFF SALDRKYGNS SRTNRATEKG YWKTTGKDRP VRHNSTTVGM KKTLVYHIGR  120
APRGARTNWV MHEYKLTDEE MAKFSIVQDA FVLCRIFQKS GTGPKNGEQY GAPFIEEEWE  180
ANEELPLVPG DEQVADELLG GGGVHVEGDD FSENVDEGIL SETAPPPPFN FYYGETSNSI  240
EQPDNFIEDD QKAAVGICET SELPDGQTLF VLPDECGLRD RLVKHEYLAE SSNDADANAA  300
DEVDAGDVDG RYVLNEPFFS ASDNLSFSDE LLLESNELSN PTESDPAAFD VLEEYLTFFD  360
ADGENEDMSF DPSEILGSDS SVPDQAVVSE VARDATEHAS SCTHTADLRH DNEASSSSSS  420
SMQKPEDPKA ESDIKYPFLK HTSHMLGSIP APFASQFTSK DAGIHLNSAP QASSSVRVTA  480
GMIIIRNMAL NGEEVNNLYG KNSDLNFIYL YGIMEGDIDS SQLLPTTGVH SSKSGPLMSR  540
YFMYFFILFW VLILSVSFKV GSCIRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-137NAC family protein