PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542075.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 322aa    MW: 35878 Da    PI: 6.4012
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542075.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1855104255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +   r +lg+f+taeeAa+a++ a+++++g
  XP_023542075.1  55 RYRGVRRRP-WGRYAAEIRDP-----HskERRWLGTFDTAEEAARAYDCAARAMRG 104
                     69*******.**********6.....335999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MEEALRRLNG MPLPASQFDD GAVAAPNDTR KKHTATGSNA DRRILREASA SGALRYRGVR  60
RRPWGRYAAE IRDPHSKERR WLGTFDTAEE AARAYDCAAR AMRGLKARTN FVYPPPPPTP  120
PPPPPSLSDQ LLSPLNFAKQ SPIPRRFDTS SFEYHDPPSF LNMLLPYDAN FVSSTPQFPK  180
IDDHFPCPKP SFTSPPITEN PPGEDDFLCD SEFIPKEPSD SGLLEEIIHG FFPKPTKKSQ  240
NPQPPNVVSD TNYHQTGFQQ QQTGYSYNYQ TGAAQVGNLN QPSYGYGSEE PAMNNGEYIS  300
VAGVLECFYG QHAECLRVLV LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-17ERF family protein