PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542138.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YB
Protein Properties Length: 179aa    MW: 19711.9 Da    PI: 6.2735
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.82.5e-5626120195
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy++plk yl++yre+++
  XP_023542138.1  26 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKSYLTRYRECDA 120
                     69******************************************************************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MADPPTSPAG GSHESGGEQS PHTGGVREQD RYLPIANISR IMKKALPANG KIAKDAKDTV  60
QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLWAMATLG FEDYIDPLKS YLTRYRECDA  120
KGSSRGGEES AKRDAVGALP GQNSQQYLQP GALTYINTQF EEPGYPKGYE YKSSPWRHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.18e-74NF-YB family protein