PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542172.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 182aa    MW: 20740.6 Da    PI: 6.1416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.5e-121365255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r+  +++Er+RR++++  ++eL +l+P++ + + + ++ ++ Le A++YIk+L+
  XP_023542172.1 13 RTDEKIIERNRREEMKALLSELHSLVPNQ-SSTEGEMTLSDQLENATNYIKQLK 65
                    777899**********************6.479999****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MADNFIYCPS STRTDEKIIE RNRREEMKAL LSELHSLVPN QSSTEGEMTL SDQLENATNY  60
IKQLKENVEK LKEKREKLMG LGEKSTITSE NKARLILQVE AHRVGSSLEI LLTTGSVYHL  120
VLRQIIQLLQ ENGTEIVDIN QSTVADRAFH KIIAQVKGAE GERICETVKK FVSQYKDDQY  180
TV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-22bHLH family protein