PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542234.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 207aa    MW: 22768.5 Da    PI: 10.1281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16e-202372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp    k++r++lg+f+taeeAa+a++aa+++++g
  XP_023542234.1 23 HFRGVRKRP-WGRYAAEIRDPA---KKTRVWLGTFDTAEEAARAYDAAARQFRG 72
                    69*******.**********83...36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAPRDKLKAA AVVVAGGKDK EVHFRGVRKR PWGRYAAEIR DPAKKTRVWL GTFDTAEEAA  60
RAYDAAARQF RGAKAKTNFP FPVAVNDLNL SPSRSSTVES SSRDPILDLN HDAVGSRPAF  120
PFNHPQFGGG IFPPPNHLLF FDHPIFSIQN HQSGVVFDRH RQKVVASGGV QSDSDSSSVI  180
DLNQNDHHKS RPVVLDLDLN FPPPESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-26ERF family protein