PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542412.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 330aa    MW: 37209.4 Da    PI: 4.4301
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542412.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19105155155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_023542412.1 105 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 155
                     59********.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEDTLFSPVK FTEHRSFTNK FSSRKQPPSQ NRLVRIAVTD PDATDSSSDE EGEFFERQRV  60
KRYVNEIKIQ TASRNTLLPS ARKRPAAEGS DSRRPVKAAP VMNGKKFRGV RQRPWGKWAA  120
EIRDPARRVR LWLGTYDTAE EAAMVYDNAA IQLRGPDALT NFAIPPPPLP ETEVEAANIP  180
SISGSYDSSC EESHNLSSPT SVLRFRTPSL EESEKPQNSS GFQKPPPPPI LPMADDQLRE  240
CQGETSFYEE YYTDFPKFED VFQLPCSESP MFLEDQPLFL EESIYNEGFS DLFTNLPDDF  300
GSPLLSSSIS QVGEDYFEDI LMGSDPLVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.15e-57ERF family protein