PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542434.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 213aa    MW: 24269.5 Da    PI: 10.2053
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.56.6e-33359459
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59
                    + Y+eClkNhAa++Ggha+DGCgEfmp  +++ +++++l+CaACgCHRnFHRre+++
  XP_023542434.1  3 IYYRECLKNHAATVGGHALDGCGEFMPLLTATpSDPTSLNCAACGCHRNFHRREPDD 59
                    57**************************99999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MFIYYRECLK NHAATVGGHA LDGCGEFMPL LTATPSDPTS LNCAACGCHR NFHRREPDDS  60
WQNLPTHRRF QSYRLCTPPS PKPQSPSSPI PLQISHIPPP VHFSAPHMLL ALSTGAAAQE  120
QRGGRFNPKQ RKRNRTKFSR DQKQKMRSFS EKMGWKIGKC DERLVEEFCN EIGIGKRVLR  180
VWMHNNKYMG GRTEKNRDSQ SSENGRDDSK QSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-57ZF-HD family protein