PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542450.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 237aa MW: 27024.4 Da PI: 5.2241

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.3	6.9e-45	15	145	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF Pt+eel+++yL+++++g+ le ++vi+ ++iy++ePwdLpk +k+++++w+fF+ r++++a+g r++r+t++gyWkatg+ v XP_023542450.1 15 PPGFRFYPTEEELISFYLRHQLNGQLLEKHRVIPLLNIYDSEPWDLPKfageLCKGDSEQWFFFVARQEREARGGRPSRTTATGYWKATGSPVYV 109 9**************************99************656764556778******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++ +glkkt+vfykgrap+g+kt+W m+eyr+ XP_023542450.1 110 YSAANKIIGLKKTMVFYKGRAPTGTKTKWKMNEYRA 145 ********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSMAIEENDS NVEYPPGFRF YPTEEELISF YLRHQLNGQL LEKHRVIPLL NIYDSEPWDL 60 PKFAGELCKG DSEQWFFFVA RQEREARGGR PSRTTATGYW KATGSPVYVY SAANKIIGLK 120 KTMVFYKGRA PTGTKTKWKM NEYRAIDDST KLRYEFSLCR VYVISGCFRA FDRRPMEVIG 180 DGRNNADQKQ KAEAITAAIS CSAPATGFCG VSGGSSGMVE DEEIEEANWE WDQIDWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-80	NAC family protein