PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542754.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 230aa MW: 25944.6 Da PI: 9.3853

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.3	1e-11	78	125	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + E+ RR+r+N++f eL ++l + +s+K +K+ iL Av+ I +L+ XP_023542754.1 78 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 125 5678*******************9...9*****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFREDFD EAHGKLNDIK 60 ESGSRKRMSS GSGASLSKAH KEKVRRNRLN DRFLELNSIL NHGTSPKIDK SVILGDAVRM 120 ILQLRDEAQK LKESNENFLE KINEMKAEKN ELRDEKQRLK EAKDNLKQKM KTFITQPSFL 180 PHPSAFSAPN HVVGAKFVPV IGYPGVSMWK LMPQGAIDTS QDHVLRPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	1e-61	bHLH family protein