PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542755.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 209aa    MW: 23531 Da    PI: 9.7218
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.6e-1257104555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +   E+ RR+r+N++f eL ++l +    +s+K +K+ iL  Av+ I +L+
  XP_023542755.1  57 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 104
                     5678*********************9...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFRMSSG SGASLSKAHK  60
EKVRRNRLND RFLELNSILN HGTSPKIDKS VILGDAVRMI LQLRDEAQKL KESNENFLEK  120
INEMKAEKNE LRDEKQRLKE AKDNLKQKMK TFITQPSFLP HPSAFSAPNH VVGAKFVPVI  180
GYPGVSMWKL MPQGAIDTSQ DHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.18e-63bHLH family protein