PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542756.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 184aa    MW: 20763.9 Da    PI: 6.5288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542756.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-0546791955
                    HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +f eL ++l +    +s+K +K+ iL  Av+ I +L+
  XP_023542756.1 46 RFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 79
                    578999999998...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFRFLEL NSILNHGTSP  60
KIDKSVILGD AVRMILQLRD EAQKLKESNE NFLEKINEMK AEKNELRDEK QRLKEAKDNL  120
KQKMKTFITQ PSFLPHPSAF SAPNHVVGAK FVPVIGYPGV SMWKLMPQGA IDTSQDHVLR  180
PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-53bHLH family protein