PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542777.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 189aa    MW: 21676.8 Da    PI: 8.6677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-111765655
                    HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    + +Er+RR++++  f++L +l+P++ + +    +  + Le A++YIk+L+
  XP_023542777.1 17 KLIERNRRAEMKALFSRLHSLVPNQ-SSTEAETTLLDQLENATNYIKQLK 65
                    689*********************6.3577779***************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MANNFIHCPS SAKIDRKLIE RNRRAEMKAL FSRLHSLVPN QSSTEAETTL LDQLENATNY  60
IKQLKENVEK LKEKKEKLMK LGEESARRSE IKARLLVQVE AHQVGSSLEF LLTTGSEYHL  120
VLKQILQLLQ ENGTQIVYIN HSTVKDRVFH KIIAEMVGEG TTSESTEGER ICETVKKFVS  180
QYKDVQYNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-16bHLH family protein