PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542786.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 175aa    MW: 19759.7 Da    PI: 7.2353
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.4e-0620591555
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    ++++ f++L +l+P++ +   + ++    Le A++YIk+L+
  XP_023542786.1 20 EMKTLFSTLHSLVPNQ-SSAEGEMTLPVQLENATNYIKQLK 59
                    7999***********6.368888****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MADNFIHYST STKTDRKIIE MKTLFSTLHS LVPNQSSAEG EMTLPVQLEN ATNYIKQLKE  60
NVEKLKEKRE KLMGSREGEI KARLLVQVEA HQVGSSLEFL LTTGSDYHLV LSQILQLLQE  120
NGTQIVHINH STIIDRVFHK IVAQMVGEGM SSEGVDGERI CETVKKFVSQ YKNGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-19bHLH family protein