PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542834.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 201aa    MW: 22460.3 Da    PI: 9.4179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08126173455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023542834.1 126 SHSVAERIRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 173
                     8*************************9....3559999***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAAEFTPNFQ SLKPSPFPLM EADSNIPVLF NDGFFSDHAA PPRFPENRRE NLPKIFSPAN  60
QLASPVFERK KRKLETDASA SSSGNSLPQR SETAINTKNS SGRGKQPEKG RGVVHVRAKR  120
GQATDSHSVA ERIRRGKINE RLRCLQDIVP GCYKTMGMAV MLDEIINYVQ SLQNQVEFLS  180
MKLTAASSYY DFNSDEAYEQ A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.14e-59bHLH family protein