PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023542912.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 941aa MW: 106760 Da PI: 8.8003

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023542912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.7	9.9e-49	49	174	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_023542912.1 49 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 142 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_023542912.1 143 FRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 174 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 941 aa Download sequence
MAIAAAASSS STMSHEEISS SNNTHNKNNN NDDNNDNCSD DQHEHDVVMP GFRFHPTEEE 60 LVEFYLRRKV EGKRFNVELI TFLDLYRYDP WELPALAAIG EKEWFFYVPR DRKYRNGDRP 120 NRVTTSGYWK ATGADRMIRT EDFRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE 180 RYQKTEISLC RVYKRAGVED HPSLPRSLPS RASSSSSSTS AIVSSTKWVL KLAMWVIFSV 240 WMVVIFLYPS SFASHLFSEW FGASGQTLFG ITGAIFLTFS APLLAIAILA AVYLIISRDD 300 HPYERKKKKK NGKEKPRWRL WTLPVLVEGP LEVVTAAELV GILVVLGYVF WAIYSYTLRM 360 LATDFSRNLT FLQISCEVLE VMGLRLGSMG LFCLGFLFLP ISRGSVLLRL IDIPFEHATR 420 YHVWLGHLTM LIFTLHGLAF VIQWLIQGRC IEQLLEWKDI GIANLPGVIS LLAGLLMWIT 480 SLPKLRTINF ELFFYTHQLY IVFVLFLALH VGDFVFSIAA GGIFIFMLDR FLRFIQSRRT 540 VDVISAKALP CGTVELIISK PRSLRYNALS FIFLQVRELS LLQWHPFSVS SSPLEGEDRL 600 AILIKVLGKW TEKLRGKILS DKAKEISSDK HQSVMTVSVE GPYGHESPYH LMYENLILVA 660 GGIGISPFLA ILSDILHRIR DGKPCLPKKI LVVWAIKNSS ELPLLSTLNV DSICPFFADK 720 LNIDISIYVT RQSQPPPEGE IQPSKVTSIC PLSKGCNMSV LVGTGDNVWS GLYVISSTVG 780 LVILVSLMDF YYINPFNIKK WWYKGLLFFL CMVASVVLFG GLVVCLWSLW EEHISSKRTT 840 HNNVNDIEKV GEDIPKDTLA QKDLNPKAFA NSTTIEYGTR PNFDEIVESV AENWGKVDIG 900 VLICGPSTLQ SSVARAIRSH NMVRRRTHHP IFHFHSHSFD L

Sequence ? help Back to Top

Protein Sequence Length: 941 aa Download sequence

MAIAAAASSS STMSHEEISS SNNTHNKNNN NDDNNDNCSD DQHEHDVVMP GFRFHPTEEE  60
LVEFYLRRKV EGKRFNVELI TFLDLYRYDP WELPALAAIG EKEWFFYVPR DRKYRNGDRP  120
NRVTTSGYWK ATGADRMIRT EDFRSIGLKK TLVFYSGKAP KGIRTSWIMN EYRLPHHETE  180
RYQKTEISLC RVYKRAGVED HPSLPRSLPS RASSSSSSTS AIVSSTKWVL KLAMWVIFSV  240
WMVVIFLYPS SFASHLFSEW FGASGQTLFG ITGAIFLTFS APLLAIAILA AVYLIISRDD  300
HPYERKKKKK NGKEKPRWRL WTLPVLVEGP LEVVTAAELV GILVVLGYVF WAIYSYTLRM  360
LATDFSRNLT FLQISCEVLE VMGLRLGSMG LFCLGFLFLP ISRGSVLLRL IDIPFEHATR  420
YHVWLGHLTM LIFTLHGLAF VIQWLIQGRC IEQLLEWKDI GIANLPGVIS LLAGLLMWIT  480
SLPKLRTINF ELFFYTHQLY IVFVLFLALH VGDFVFSIAA GGIFIFMLDR FLRFIQSRRT  540
VDVISAKALP CGTVELIISK PRSLRYNALS FIFLQVRELS LLQWHPFSVS SSPLEGEDRL  600
AILIKVLGKW TEKLRGKILS DKAKEISSDK HQSVMTVSVE GPYGHESPYH LMYENLILVA  660
GGIGISPFLA ILSDILHRIR DGKPCLPKKI LVVWAIKNSS ELPLLSTLNV DSICPFFADK  720
LNIDISIYVT RQSQPPPEGE IQPSKVTSIC PLSKGCNMSV LVGTGDNVWS GLYVISSTVG  780
LVILVSLMDF YYINPFNIKK WWYKGLLFFL CMVASVVLFG GLVVCLWSLW EEHISSKRTT  840
HNNVNDIEKV GEDIPKDTLA QKDLNPKAFA NSTTIEYGTR PNFDEIVESV AENWGKVDIG  900
VLICGPSTLQ SSVARAIRSH NMVRRRTHHP IFHFHSHSFD L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	310	ERKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.2	1e-102	NAC family protein