PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542961.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 256aa    MW: 27910.9 Da    PI: 9.5731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-1267113354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riNs +++Lr l+P +      K +Ka+ L ++v  +k+L
  XP_023542961.1  67 KNHSEAERRRRERINSHLSTLRGLVPCP-----AKRDKATLLAEVVSQVKEL 113
                     58*************************8.....699******9999888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MAYSYDATAS IDSFLHSLEN FNCGFVRGGS ILSQSLVLNG EKGGVAKAPI LPAKKRGSEE  60
KVLAALKNHS EAERRRRERI NSHLSTLRGL VPCPAKRDKA TLLAEVVSQV KELKKKAAEA  120
INGVFVPMDT DEVKVEPCGI EANAAYMTFK ATLCCEYRPE LLSDLKQALD ALHLKLAKAE  180
ISTLGNRVKN VFFFTSSIAE NGEHSKASQR LVSSVHQAIS FVLEKASSQE YSPRTTLPTK  240
RQRLCSSYTS SSSSGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-34bHLH family protein