PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543092.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 163aa MW: 18547.6 Da PI: 8.4531

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.5	6.6e-29	98	156	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk++ +pr+YY+C+s gC vkk+ver+++d ++v++tYeg Hnh XP_023543092.1 98 LDDGFKWRKYGKKSVKNTSHPRNYYKCSSGGCGVKKRVERDRDDSSYVITTYEGIHNHA 156 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MNPLQNPSFF LDYHQFQDSS FSFMDLFDVS SYPLPDFGLE AETTASLLTE ARTGAERRST 60 EATSIDNNSM QVEKRKKERG GGCNNRVAFR TKLVSDILDD GFKWRKYGKK SVKNTSHPRN 120 YYKCSSGGCG VKKRVERDRD DSSYVITTYE GIHNHASPFS DMV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	74	113	KRKKERGGGCNNRVAFRTKLVSDILDDGFKWRKYGKKSVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-40	WRKY family protein