PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543274.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 322aa MW: 35291.6 Da PI: 8.6049

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543274.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l+pGfrFhPtdeel+ +yL kkv +++++ +i+ vd++k+ePwdLp+k+ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_023543274.1 14 LAPGFRFHPTDEELIAHYLLKKVLDSHFSS-PAIAYVDLNKSEPWDLPEKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSS 107 579**********************999.78***********8888899**********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+grapkg+kt+Wvmhe+rl XP_023543274.1 108 kTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFRL 141 56778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MDGSVHRSSN NGYLAPGFRF HPTDEELIAH YLLKKVLDSH FSSPAIAYVD LNKSEPWDLP 60 EKAVMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREITSSKTN SVVGMKKTLV 120 FYTGRAPKGQ KTHWVMHEFR LAGKFAYHFL SAASSKDEWV ISRVFKKTSA AMHGGVMKKT 180 RRDPEPTSPS SVSLPPLLDS SPYLSAAADT SISTSAFANR EGSSLDDQRE HELHVTCFST 240 NNLSYPAASF PAGGGPNLSV SAFPNLRSIQ ENLQAPFFSP VSPPLVHLLS GAADVDGCGG 300 APSPEDSRTI GSADLGAYMW TF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	6e-92	NAC family protein