PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543353.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 328aa    MW: 36257.9 Da    PI: 7.8369
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.000162312681254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + +++L++A+ YI+ L
  XP_023543353.1 231 RKEKLGDRISALQRLVAPF-----GKTDTSSVLTEAIGYIQFL 268
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MESANLQHQL QELFVGYSSL VSAPRTAPIT HECSPNIILD GDSYNNHYLV DQSIPCSREN  60
ENENPWFNFS STYQQEQPNE QQLSTLYSSL QSPASYGGFQ GLSAGSNPNY YRNSSTSTLD  120
LLSSSSFSSS MGYNLQAAHR HMDFLSNYSS GFNKNRAVFG YAHQNHHEHV QDSMNNNNSP  180
SNSSNKASSV SVGRAKRPAN SLSVPKKCSN NPESKKSCSS SRSSCPPLKV RKEKLGDRIS  240
ALQRLVAPFG KTDTSSVLTE AIGYIQFLHD QVETLSMPYL ASSQSKPYQK QQQPGLIEED  300
GTKPRQDLRS RGLCLMPLSC ASFIHGFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-30bHLH family protein