PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543484.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 253aa    MW: 28263.3 Da    PI: 7.7195
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.5e-1479131155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++ Lr+llP+ +   + kKls  ++  +   YI +Lq
  XP_023543484.1  79 KKLNHNASERDRRKKINSLYSSLRSLLPStD---QMKKLSNPATISRILSYIPELQ 131
                     6789*************************77...9999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MLAVSSPLFS TLQWPLEDPI SLHNHHNSPF PPFEPSDNSF YLHFPPPPPL QPPHVDLDHY  60
PSSATPSPKA GANVSKMAKK LNHNASERDR RKKINSLYSS LRSLLPSTDQ MKKLSNPATI  120
SRILSYIPEL QQQVEGLMRK KEELMAAMVG QEVKSDKEKK TKCAATSSSS IVSTSRLGQR  180
EMAIQISTDI NGGHQNSLSE ILVCLEEEGL LLLNASSFES FDGKVFHNLH LQMESSCRME  240
PKMLSNKLLE MFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-27bHLH family protein