PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543592.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 172aa    MW: 19604.3 Da    PI: 9.5669
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.61.4e-3077134158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e  +k++  ++kpylheSRh hA+rR+Rg+ GrF
  XP_023543592.1  77 EEPVYVNAKQYHGILRRRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRF 134
                     69*******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAPPPYGELV VACQSKDASI VLPLMNNEHY EASTHETTAT SYQYKDVYYG QLMPPFGFQT  60
LHNSEYTRMT LPLAMAEEPV YVNAKQYHGI LRRRQSRAKA EVLNKISRSQ KKPYLHESRH  120
LHAMRRERGC RGRFVSKKKM AEPIASMADD GKGSNMSSNC YQGSELHLSA YI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-34NF-YA family protein