PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543690.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 258aa    MW: 29246 Da    PI: 9.4162
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.72.9e-33581972128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.......leleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgy 82 
                     p+G++F+P+d++++ e+L++kve++k       +e+ ++++   +i++++P++Lp  ++++ +  +fF++ +k+y+ g+rk+r++k      + +
  XP_023543690.1  58 PAGVKFDPSDQQIL-EHLEAKVERDKrklhpliHEFITTLEGDdGICYTHPQNLP-GMRKDGQIRHFFHRPSKAYTAGTRKRRKVKadeegsDTR 150
                     89**********99.99******9996665442222222443335**********.566677788******************855556555778 PP

             NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     W++tgk+++v+  +g ++g kk+Lv+y  +g+++k++kt+W+mh+y+l
  XP_023543690.1 151 WHKTGKTRPVMG-GGVVIGFKKILVLYsnHGNQRKPQKTNWIMHQYHL 197
                     ************.**************7768999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MMIWFSNTND AVFTDGNHQD DRSPVAFPAL AGPTCAHSLH FQLQLQLQGG LEDWGRAPAG  60
VKFDPSDQQI LEHLEAKVER DKRKLHPLIH EFITTLEGDD GICYTHPQNL PGMRKDGQIR  120
HFFHRPSKAY TAGTRKRRKV KADEEGSDTR WHKTGKTRPV MGGGVVIGFK KILVLYSNHG  180
NQRKPQKTNW IMHQYHLGVT EHEKDGQLVA SKVFFQKRPR QSCSHQNPTT QWDGGGHSPE  240
ISAVFIDCSN PMMSSNYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28470.12e-94NAC family protein