PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543697.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 208aa MW: 22253.9 Da PI: 7.1808

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113	4.2e-35	55	131	6	66
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................s 66 +++ ++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt s XP_023543697.1 55 SSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTgtvpaapistispamaS 131 5789********************************************************44444443322222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MGSEIALHKF PSSSDHHSQP TAASHSVVRS NASPTNVTQQ SVVPRKSTAS LSSSSSSRDR 60 HTKVNGRGRR VRMPALCAAR IFQLTRELGH RSDGETIEWL LRQAEPSIIA ATGTGTVPAA 120 PISTISPAMA SSGPSVSCRV QSVGVAADEQ GMFAMPPPSC RLDLCQPVGL DYSAAGNDYR 180 HMPFTALLLQ PSTADEAEER QEEEVFRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	3e-38	TCP family protein