PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543724.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 177aa    MW: 19609.7 Da    PI: 8.6975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.1e-162271255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_023543724.1 22 LYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVYYLRG 71
                    59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEGGGEGGRE GTRKRGVHNQ KLYKGIRMRK WGKWVAEIRE PNKRSRIWLG SYSSPVAAAR  60
AYDTAVYYLR GPSARLNFPE LLAGEGRGIS GGGCGNMSAA TIRKKATEVG ARVDALESSL  120
GHHQHNHNNR NHHSHASASP PETKVCSGFL DRMDLNKLPD PEEDDEEGDG EFEWERQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.11e-48ERF family protein