PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543806.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 201aa    MW: 23291.3 Da    PI: 6.6359
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind97.21.7e-30161322102
                     HHHHHHHHHCTG.........................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBT CS
    HSF_DNA-bind   2 Flkklyeilede.........................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekk 71 
                     Fl+k+y++l+++                           ++++sw+++g+ f+v+ + +f++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++  
  XP_023543806.1  16 FLSKTYDLLQEAgsfhfkaadeedeedeedeeaeengGGNRIVSWNADGSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKR-- 108
                     77788888875555555555555556666666666667899************************************************9998.. PP

                     TTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  72 skskekiweFkhksFkkgkkellekikrkks 102
                            weFkh++F++g++++l +i rkk 
  XP_023543806.1 109 -------WEFKHEKFQRGNRHMLVEIVRKKC 132
                     .......*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MSLVMQSSRI RNPAPFLSKT YDLLQEAGSF HFKAADEEDE EDEEDEEAEE NGGGNRIVSW  60
NADGSGFIVW SPADFSEVLL PKYFKHNNFS SFIRQLNTYG FKKTSPKRWE FKHEKFQRGN  120
RHMLVEIVRK KCEPSVFPAF LRSSHEGAAT MGVDQENGDH LLLMEENKNL RRQKLELQAQ  180
IAQFKALHIR LLDCVGRRIE K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.19e-39HSF family protein