PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543907.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 448aa MW: 49621.8 Da PI: 4.6995

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.8	1.9e-44	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPt elv++yLkkkv ++kl+ vi+e+diyk+ PwdLp k ++k+++ +wyfF++r++k+a+g+r +r+t+ g Wk+tgkd++v XP_023543907.1 6 LPPGFRFHPTHVELVMYYLKKKVMQQKLPQ-GVISELDIYKYAPWDLPdKsCLKSGDLKWYFFCPRERKHASGTRISRTTQFGHWKSTGKDRPVA 99 79***********************999.99**********96358888999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg ktL+f + ++ kg +tdWvmheyr+ XP_023543907.1 100 Y-NNKNVGHIKTLTFVRDKSTKGGQTDWVMHEYRI 133 .9999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MTERSLPPGF RFHPTHVELV MYYLKKKVMQ QKLPQGVISE LDIYKYAPWD LPDKSCLKSG 60 DLKWYFFCPR ERKHASGTRI SRTTQFGHWK STGKDRPVAY NNKNVGHIKT LTFVRDKSTK 120 GGQTDWVMHE YRIEENSLSS KNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FNEEDWKEDG 180 VEEMGSFEVD LSSGLSVLSS KEPLNSFAPD TSMTPSNVFG CSSASCISEN LASTSKEIPQ 240 NISGGIAPVE IPQNLDSADY LFTVEDIFPE DGNLNLIVDD GFQATVPASK HTDQNDPIYG 300 GLGYLDAWYP LNANITEDGN AYVTGNGAGY SSEQTFPIYN EAMFSSDQMP YLELNDLNAP 360 LSDTYRDTQM SNAVYNCSSV IEQPCFHFSS FGAANQHVPS CQYPSLHHSS DQICHPTDLG 420 YPDANMSASS QENIHSNSNG GSNGYKPP

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MTERSLPPGF RFHPTHVELV MYYLKKKVMQ QKLPQGVISE LDIYKYAPWD LPDKSCLKSG  60
DLKWYFFCPR ERKHASGTRI SRTTQFGHWK STGKDRPVAY NNKNVGHIKT LTFVRDKSTK  120
GGQTDWVMHE YRIEENSLSS KNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FNEEDWKEDG  180
VEEMGSFEVD LSSGLSVLSS KEPLNSFAPD TSMTPSNVFG CSSASCISEN LASTSKEIPQ  240
NISGGIAPVE IPQNLDSADY LFTVEDIFPE DGNLNLIVDD GFQATVPASK HTDQNDPIYG  300
GLGYLDAWYP LNANITEDGN AYVTGNGAGY SSEQTFPIYN EAMFSSDQMP YLELNDLNAP  360
LSDTYRDTQM SNAVYNCSSV IEQPCFHFSS FGAANQHVPS CQYPSLHHSS DQICHPTDLG  420
YPDANMSASS QENIHSNSNG GSNGYKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-81	NAC family protein