PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023543952.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 368aa    MW: 41462.1 Da    PI: 6.2783
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023543952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-1872130255
             AP2   2 gykGVrwdkkrgrWvAeIrdpse.ng....kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr++  +g+WvAeIr+p   n+    k+  r +lg+f ta +Aa a+++a+k+++g
  XP_023543952.1  72 NFRGVRQRT-WGKWVAEIREPIAsNNtrvkKKgSRLWLGTFATAHQAAVAYDEAAKAMYG 130
                     69****999.**********7567889*86448************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MTSENSNGEK TSRKRRNGFV SVVDTLNKWK KLNNQLEFLA KDGVEEVRRV PAKGSKKGCM  60
RGKGGPQNSD CNFRGVRQRT WGKWVAEIRE PIASNNTRVK KKGSRLWLGT FATAHQAAVA  120
YDEAAKAMYG PFARLNFPDS SSLKPVTAEH SDTVSPVASS SSSSSFLNGV SAEKLNCEYE  180
SMEELKVKVE ETARNGVNYA DANPNSVYDS NNIGNRSTEG DIKDGLADVV RSHDIKKYSH  240
DQNDPSELCF KFEAMDTNGY NDINDCNQYL LQKLQSDAYA RRTYWIPAEW EVGDLGPATK  300
VMKGKPTEME SYGDCMDFNR DLSLLLDRQK HMGVGEQRVE DCNFEFLRPD YDFGLEEERK  360
WLDSCFHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-41ERF family protein