PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544205.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 244aa    MW: 26597.6 Da    PI: 7.0289
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544205.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.72.1e-3146100358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     k +Y+eClkNhA+ +Ggha+DGCgEf+++ g+egt +alkCaAC+CHRnFHR+e +
  XP_023544205.1  46 KPKYRECLKNHAVGIGGHALDGCGEFLAA-GAEGTLDALKCAACNCHRNFHRKEID 100
                     679*************************9.999********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDFEDEEEHE EEIEMAAASY DSLPNSAARV KLTNSTDQVI SSGQRKPKYR ECLKNHAVGI  60
GGHALDGCGE FLAAGAEGTL DALKCAACNC HRNFHRKEID NLDSAIGVGH GIGEPFLLPH  120
PGQFSPYYRT PAGYLHVAPH HRPLALPSTS GGGGSHSREE EEDMSNPSGG GGGGGSSSLG  180
RKRFRTKFTQ EQKDRMLGLA ETLGWRIQKQ DEAVVQQFCN DTGVKRHVLK VWMHNNKHTL  240
GKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-61ZF-HD family protein