PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544292.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 276aa    MW: 30821.3 Da    PI: 6.3763
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19118168255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_023544292.1 118 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFKTAEEAALAYDKAALRIRG 168
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGIQQDQSEA ILENVWANFI GQSGLDGQGG KKSGKSWTEL PSLRYRDGSM EGVLERLPSL  60
GRWVSMGDEA WEELLDGVVP VSNAEQCFNE NLENTPFSNS GFNVDRRRSG KTVATTKHYR  120
GVRRRPWGKY AAEIRDSSRK GARVWLGTFK TAEEAALAYD KAALRIRGPK AHLNFPVQTV  180
AEAMGMHLST KNDRLPSFQG HDSSSYSPLG SHGSVSITGK RSTRDWEDNL NFSIMELEQP  240
TPKRKSSTNN MLFDDFDVFE FQDLGSDYLD SLLSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.17e-34ERF family protein