PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544546.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 342aa    MW: 37450.9 Da    PI: 4.7743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20147197256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+t eeAa a+++a+ kl+ge
  XP_023544546.1 147 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTSEEAALAYDKAAYKLRGE 197
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MAAAIDVYTG ISTQVYCSDP FSEELMKALQ PFMKSAVSTS YSSSSSSSVS CQPILSTDVC  60
SPSSTCLFSQ GFSGIEQMGI EQSGPIGLNN LTPSQICQIQ AQIQLPQQTM SSLSSSSSSF  120
QSQYCNFLAP KSIPMKLIGS PSKPTKLYRG VRQRHWGKWV AEIRLPKNRT RLWLGTFDTS  180
EEAALAYDKA AYKLRGEFAR LNFPHLKHQF GEFKPLHPSV DAKLQAICES LKQGKTEKLC  240
SAEDEKANTS PPPSESNLVV DNYWEPELKS EVETSSSSSS SFSSSSPSRS EELSTGSSPE  300
SSISFLDFSD SQWGEGEAFC LEKFPSVEID WAALSQMVES EC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.14e-59ERF family protein