PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544832.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 219aa MW: 25020.3 Da PI: 9.0135

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.6	2.2e-32	142	200	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++ +prsYYrCt ++C+vkk+ver aedp++v++tYeg+H h+ XP_023544832.1 142 LDDGYKWRKYGQKVVKNTLHPRSYYRCTEENCKVKKRVERLAEDPRMVITTYEGRHAHS 200 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MGSSASEEDI IMATLLQAEQ AAAAITTNFA SFPENINNLV QQTLKPFLFF KADDQYSLQQ 60 QQQQQSVFPF PFPFPSTTAT ATSHLLSSLR DAGESGNHGD CDGDNRKGGL RVRTVKMKRM 120 KGRRKVREPR FCFKTMTDVD VLDDGYKWRK YGQKVVKNTL HPRSYYRCTE ENCKVKKRVE 180 RLAEDPRMVI TTYEGRHAHS PSDRNLEDTN MGCLNTFFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	1e-45	WRKY family protein