PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544840.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 249aa MW: 27837 Da PI: 9.7272

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.9	4e-37	61	119	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg r+n+k+ XP_023544840.1 61 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKR 119 6789************************************************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MVFPSHPSNY LDPTTHQWQH QTPTHQSGTS FQLVSPPRAP PQVRPGSMVD RARMANLPVP 60 ETALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG GGYRRNNKRT 120 KSTSKSPVNS QCQPTTITEI SGGETMRLNY VQNEGGMDST HPPIGITSFL GFDQIQWRPQ 180 LQLHRSQPAR LLGNDGGGGG DASSSYSIVG KMEATKMEDD GEHHVNVGKP YWDRHYWNAF 240 NPSSSSSHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	3e-46	Dof family protein