PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544852.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 236aa MW: 24377.1 Da PI: 8.163

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.8	1.1e-38	27	87	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s XP_023544852.1 27 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 87 57899****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MPSDVGDHRK TASKLLGSGG GVCPPSEQEH LPCPRCDSTN TKFCYYNNYN FSQPRHFCKS 60 CRRYWTHGGT LRDIPVGGGS RKNAKRSRTC FPAATAVVSS SSGSLGYSAS QLDHHSLPAT 120 SMLLPLVSGH GGGGGDLKAA SGNMCGSFTS LLNTHAPGFW SLGGFGLGLG SGFEDLGYGA 180 ASSRVAWPFL GLGESGHGGA PSAWQFENGD AAGFVGAADC LSWPELAIST PGNGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	1e-53	Dof family protein