PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544920.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 351aa    MW: 40561.7 Da    PI: 9.9213
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.11.6e-187100199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                     ffk+l++ +   +  l++pkkf++++g+    s  ++l+ ++g +W+v l++  + g+++l+kGW +F++  +L+ g  +vF+l+gr s+f   v
  XP_023544920.1   7 FFKILLHRNLEDK-KLMIPKKFVKKYGK--LLSSAVILKLPDGMKWKVGLTMAAN-GAVWLQKGWHKFANHYRLEFGSLLVFRLEGRsSSF--EV 95 
                     7888866666555.5***********84..47889***************65444.469**************************998888..99 PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++f+ 
  XP_023544920.1  96 TIFDP 100
                     99875 PP
2B356.55e-18152243194
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+ vl +s+v  + ++v+p kfa+++  +k  s    +++ +gr+W + ++++++ ++  + ++GWk+Fv++n LkegD+v F+++++ +f l+ 
  XP_023544920.1 152 FQVVLNQSNVCGRYNMVFPAKFARSYLCEK--SGNFNVQTANGRKWPLLYKWSGSVDKfAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF-LFT 243
                     788899999999999***********5443..4479999*************88888888999*********************9986666.444 PP
3B351.61.7e-16257349198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv ++  + k+++l +p  f +eh +++ +s  ++l++  +++W v+l  +++ g + +++GW++F  +ngL++gD+++F+++++++  ++v+
  XP_023544920.1 257 FFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKS--VKLQT-GNKEWMVTL--KQYEGCMRFSGGWRKFYGENGLNDGDTCLFEMVSKQNCVFKVT 346
                     899999999*****************9887665..77655.78*******..88888899***********************886644446888 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_023544920.1 347 IFK 349
                     876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MASSPQFFKI LLHRNLEDKK LMIPKKFVKK YGKLLSSAVI LKLPDGMKWK VGLTMAANGA  60
VWLQKGWHKF ANHYRLEFGS LLVFRLEGRS SSFEVTIFDP TGLESEYSSL HVCDSITESE  120
EDDDSVSDSD EEDYEIGVSR RRRKSATEKP GFQVVLNQSN VCGRYNMVFP AKFARSYLCE  180
KSGNFNVQTA NGRKWPLLYK WSGSVDKFAY VSSGWKRFVQ ENLLKEGDVV FFEMIKKGRF  240
LFTKLQDKNT ASTRNPFFKV DIHYKSYKNR ILNIPMAFGK EHFSPEMKSV KLQTGNKEWM  300
VTLKQYEGCM RFSGGWRKFY GENGLNDGDT CLFEMVSKQN CVFKVTIFKQ P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-33B3 family protein