PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545006.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 230aa    MW: 25934.1 Da    PI: 6.6034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-08133174854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023545006.1 133 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 174
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEPHHLSNPS PHLHHSAMED HHILHRHHHV HVHDLDPDPD PDPDPDSIWS SLLPFHLPDP  60
HHQFPSSSTH LLISYATPSS RVDDNEEPEE ELGAMKEMMY KIAAMQPVDI DPSTIRKPKR  120
RNVRISDDPQ SIAARLRRER ISEKIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL  180
LQSSDQPQQP RTDGGAAAGG WPLTFHMADG SASSSTSMET TPAIITPSGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.15e-48bHLH family protein