PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545037.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 226aa    MW: 25096.3 Da    PI: 6.2725
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r +lg+f taeeAa+a+++a+  l+g
  XP_023545037.1 35 KFVGVRQRP-SGRWVAEIKDtT----RKIRMWLGTFETAEEAARAYDEAACLLRG 84
                    799******.7*********33....24**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEINFQSPET HGGAAVPVVK TSKFKGKTRG NNGNKFVGVR QRPSGRWVAE IKDTTRKIRM  60
WLGTFETAEE AARAYDEAAC LLRGSNTRTN FFIPQISTNS PIASRIRTLL NSKKPLENPP  120
AAAASAAVPA PTIQDGRMFD GDYKPDMTNC SEKTEMGSCC SSDSCRFVDG FWNSEDLELC  180
DFERMKFERQ ISGCLYAMNG VHEYMEAVHE ASESIWDIPP LCSLFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-26ERF family protein